Installation guide for CHASTE 3.3 on Ubuntu 15.04 Vivid Vervet
  1. Install the CHASTE package
    sudo gedit /etc/apt/sources.list.d/chaste.list


and write (vivid refers to the Ubuntu version)

	deb http://www.cs.ox.ac.uk/chaste/ubuntu vivid/ 


Then install the package:
	sudo apt-get update
	sudo apt-get install chaste-source



  1. Unpack
    cd ~
    tar -jxf /usr/src/chaste-source.tar.bz2
    cd chaste-source


  1. Fix HDF5 dependency

There may be an issue with linking of the HDF5 library. Do the following:

    sudo ln -s /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so /usr/lib/libhdf5.so

and

    cd ~/chaste-source
    gedit SConstruct


Then modify the following line

    cpppath = [Dir('.'), Dir('cxxtest')]


to

    cpppath = [Dir('.'), Dir('cxxtest'), Dir('/usr/include/hdf5/openmpi')]


  1. Compile

    cd ~/chaste-source
    scons


Hopefully it should work!
There are no comments on this page.
Valid XHTML :: Valid CSS: :: Powered by WikkaWiki